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EN ISO 21393:2021

(Main)

Genomics informatics - Omics Markup Language (OML) (ISO 21393:2021)

Genomics informatics - Omics Markup Language (OML) (ISO 21393:2021)

This document is applicable to the data exchange format that is designed to facilitate exchanging omics data around the world without forcing changes of any database schema.
This document specifies the characteristics of OML from the following perspectives.
From an informatics perspective, OML defines the data exchange format based on XML. This document gives guidelines for the specifications of the data exchange format, but this document excludes the database schema itself.
From a molecular side of view, this document is applicable to all kinds of omics data, while this document excludes the details of the molecules (e.g., details of genomic sequence variations or whole genomic sequence). This document is also applicable to the molecular annotations including clinical concerns and relations with other omics concerns.
From an application side of view, this document is applicable to the clinical field including clinical practice, preventive medicine, translational research, and clinical research including drug discovery. This document does not apply to basic research and other scientific fields.
From a biological species side of view, this document is applicable to the human health-associated species as human, preclinical animals, and cell lines. This document does not apply to the other biological species.

Genomik-Informatik - Omics Auszeichnungssprache (OML) (ISO 21393:2021)

Informatique génomique - Langage de balisage Omics (OML) (ISO 21393:2021)

Le présent document est applicable au format d'échange de données qui est conçu pour faciliter l'échange de données omiques dans le monde entier sans imposer le moindre changement de schéma de base de données.
Le présent document spécifie les caractéristiques de l'OML selon les perspectives suivantes.
D'un point de vue informatique, OML définit le format d'échange de données basé sur XML. Le présent document établit des lignes directrices pour la spécification du format d'échange de données, mais il exclut le schéma de base de données proprement dit.
Du point de vue moléculaire, le présent document est applicable à toutes les sortes de données omiques bien qu'il exclue les détails relatifs aux molécules (par exemple, les détails des variations de la séquence génomique ou la séquence génomique complète). Le présent document est également applicable aux annotations moléculaires, y compris les questions cliniques et les relations avec les autres questions omiques.
Du point de vue de l'application, le présent document est applicable à la santé humaine, y compris les pratiques cliniques, la médecine préventive, la recherche translationnelle et la recherche clinique, notamment la découverte de médicaments. Le présent document ne s'applique pas à la recherche fondamentale et aux autres domaines scientifiques.
Du point de vue des espèces biologiques, le présent document est applicable aux espèces associées à la santé humaine telles que l'homme, les animaux en préclinique et les lignées cellulaires. Le présent document ne s'applique pas aux autres espèces biologiques.

Zdravstvena informatika - Označevalski jezik OMICS (OML) (ISO 21393:2021)

General Information

Status
Published
Publication Date
10-Aug-2021
Withdrawal Date
27-Feb-2022
ICS
35.240.80 - IT applications in health care technology
Technical Committee
CEN/TC 251 - Medical informatics
Drafting Committee
CEN/TC 251/WG 1 - Information models
Current Stage
6060 - Definitive text made available (DAV) - Publishing
Start Date
11-Aug-2021
Completion Date
11-Aug-2021
Ref Project
SIST EN ISO 21393:2021 - Health informatics - Omics Markup Language (OML) (ISO 21393:2021)

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SLOVENSKI STANDARD
SIST EN ISO 21393:2021
01-oktober-2021
Zdravstvena informatika - Označevalski jezik OMICS (OML) (ISO 21393:2021)
Health informatics - Omics Markup Language (OML) (ISO 21393:2021)
Medizinische Informatik - OMICS Auszeichnungssprache (OML) (ISO 21393:2021)
Informatique de santé — Langage de balisage Omics (OML) (ISO 21393:2021)
Ta slovenski standard je istoveten z: EN ISO 21393:2021
ICS:
35.060 Jeziki, ki se uporabljajo v Languages used in
informacijski tehniki in information technology
tehnologiji
35.240.80 Uporabniške rešitve IT v IT applications in health care
zdravstveni tehniki technology
SIST EN ISO 21393:2021 en,fr,de
2003-01.Slovenski inštitut za standardizacijo. Razmnoževanje celote ali delov tega standarda ni dovoljeno.

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SIST EN ISO 21393:2021

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SIST EN ISO 21393:2021


EN ISO 21393
EUROPEAN STANDARD

NORME EUROPÉENNE

August 2021
EUROPÄISCHE NORM
ICS 35.240.80
English Version

Genomics informatics - Omics Markup Language (OML)
(ISO 21393:2021)
Informatique génomique - Langage de balisage Omics Medizinische Informatik - OMICS
(OML) (ISO 21393:2021) Auszeichnungssprache (OML) (ISO 21393:2021)
This European Standard was approved by CEN on 29 September 2020.

CEN members are bound to comply with the CEN/CENELEC Internal Regulations which stipulate the conditions for giving this
European Standard the status of a national standard without any alteration. Up-to-date lists and bibliographical references
concerning such national standards may be obtained on application to the CEN-CENELEC Management Centre or to any CEN
member.

This European Standard exists in three official versions (English, French, German). A version in any other language made by
translation under the responsibility of a CEN member into its own language and notified to the CEN-CENELEC Management
Centre has the same status as the official versions.

CEN members are the national standards bodies of Austria, Belgium, Bulgaria, Croatia, Cyprus, Czech Republic, Denmark, Estonia,
Finland, France, Germany, Greece, Hungary, Iceland, Ireland, Italy, Latvia, Lithuania, Luxembourg, Malta, Netherlands, Norway,
Poland, Portugal, Republic of North Macedonia, Romania, Serbia, Slovakia, Slovenia, Spain, Sweden, Switzerland, Turkey and
United Kingdom.





EUROPEAN COMMITTEE FOR STANDARDIZATION
COMITÉ EUROPÉEN DE NORMALISATION

EUROPÄISCHES KOMITEE FÜR NORMUNG

CEN-CENELEC Management Centre: Rue de la Science 23, B-1040 Brussels
© 2021 CEN All rights of exploitation in any form and by any means reserved Ref. No. EN ISO 21393:2021 E
worldwide for CEN national Members.

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SIST EN ISO 21393:2021
EN ISO 21393:2021 (E)
Contents Page
European foreword . 3

2

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SIST EN ISO 21393:2021
EN ISO 21393:2021 (E)
European foreword
This document (EN ISO 21393:2021) has been prepared by Technical Committee ISO/TC 215 "Health
informatics" in collaboration with Technical Committee CEN/TC 251 “Health informatics” the
secretariat of which is held by NEN.
This European Standard shall be given the status of a national standard, either by publication of an
identical text or by endorsement, at the latest by February 2022, and conflicting national standards
shall be withdrawn at the latest by February 2022.
Attention is drawn to the possibility that some of the elements of this document may be the subject of
patent rights. CEN shall not be held responsible for identifying any or all such patent rights.
Any feedback and questions on this document should be directed to the users’ national standards
body/national committee. A complete listing of these bodies can be found on the CEN websites.
According to the CEN-CENELEC Internal Regulations, the national standards organizations of the
following countries are bound to implement this European Standard: Austria, Belgium, Bulgaria,
Croatia, Cyprus, Czech Republic, Denmark, Estonia, Finland, France, Germany, Greece, Hungary, Iceland,
Ireland, Italy, Latvia, Lithuania, Luxembourg, Malta, Netherlands, Norway, Poland, Portugal, Republic of
North Macedonia, Romania, Serbia, Slovakia, Slovenia, Spain, Sweden, Switzerland, Turkey and the
United Kingdom.
Endorsement notice
The text of ISO 21393:2021 has been approved by CEN as EN ISO 21393:2021 without any modification.

3

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SIST EN ISO 21393:2021

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SIST EN ISO 21393:2021
INTERNATIONAL ISO
STANDARD 21393
First edition
2021-07
Genomics informatics — Omics
Markup Language (OML)
Informatique génomique — Langage de balisag
...

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